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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886003.1_cds_XP_016440108.1_35598
CDS Infomation

[gene=LOC107765921] [db_xref=GeneID:107765921] [protein=aspartic proteinase nepenthesin-2-like] [protein_id=XP_016440108.1] [location=complement(34584..35960)] [gbkey=CDS]
Sequence

ATGGCTTCTGCTTTTTTTCCTCTCCTCCTTTTTCTCTCTATCCTTTCTCTCCTCTTTCCC
TTCATTTCTTCATCAAACTCCCCCACAACAATCCCTCTCTCACTTTTCAACACCAACCCA
AATCAAGATTTTTACCAAAAGCTCACTCATTTAGCTTCTGTTTCCTTAGCTAGAGCACAT
CATATAAAGAATTCTCAAGATTCTTCTGTTTCCAAAATCCCTTTATACCCTCATAGCTAT
GGAGGTTACTCAATTACTCTTGGATTTGGTACTCCTCCTCAAAAAATGTCTTTTATTATG
GACACTGGCAGTAGCTTTGTTTGGTTCCCATGTACTAAAAAATACCAATGTTCCAAATGT
CCTGTTTCTTCACAAAATATTCCTACATTTGTTCCCAAGTTGTCAACTTCAGCTAAGGTT
GTTGGATGTTTGAATCCAAAATGTAGCTGGATTCACCCCAAAACCAATCCAAAATCTCGT
TGCCAAGATTGTCAATCACCCAACACATCAAATTGCAAACAGGTTTGTCCACCTTATATA
ATTCTATATGGTGCAGGTTCCACAGGTGGACTTGGCATAGTTGAAACATTAAACTTACCT
AACAAGAAAATACCAAATTTTCTTGTTGGTTGTTCTTTATTTTCCTCTCAACAACCGGCT
GGAATCGCGGGTTTTGGTAGGGGAATTTCATCATTGCCAAATCAATTAGGTGCCAAGAAA
TTGTCATATTGTCTTGTGTCTCATAGATTTGATGACACTAGCAAAAGTAGCATGCTTGTT
TTGGATAGTTCTAATGAAAAGTCTGCAAATTTAAGTTACACCCCTTTGCTGAAAAATCCA
GTGGTTGCTAGAAGAAATGCATTATTAGAGTATTATTATGTTGGCTTAAGAAAAATCACA
GTTGGTGGGCAGAAAGTGAAAATACCATATCATTATTTGACACCAAATTCCAAAGGGGAT
GGTGGGACTATAGTGGATTCAGGGACAACTTTCACATTCTTGAATCATGGAATTTTTGAA
CCTGTGATGAGTGCATTTGTGAACCAAGTAAAGGGGTTTTCAAGAACTGAGAAAATTGAA
AAATTGACAGGTTTAAGGCCATGTTTTAATGTTTCAGGGCATAAAACAGTGTCATTGCCA
GAGCTGAAGTTTCATTTCAAAGGTGGTGCAGAAATGGCATTGCCATTGGCAAATTACTTC
TCTATTGTTGGTGAGAAAGATGTGATTTGTTTGACTATGGTGACTGATAGAGATTCCGGG
TCCGAATTATCGACCGGGCCGTCGATAATTCTTGGGAATTTTCAGATGCAGAATTTGTTT
GTTGAGTTTGATCTCAAGAATGAGAAGTTTGGGTTCAGACAGCAAGTTTGCAAATGA

Peptide Sequence

PEP ID

XP_016440108.1
PEP Infomation

PREDICTED: aspartic proteinase nepenthesin-2-like [Nicotiana tabacum]
Sequence

MASAFFPLLLFLSILSLLFPFISSSNSPTTIPLSLFNTNPNQDFYQKLTHLASVSLARAH
HIKNSQDSSVSKIPLYPHSYGGYSITLGFGTPPQKMSFIMDTGSSFVWFPCTKKYQCSKC
PVSSQNIPTFVPKLSTSAKVVGCLNPKCSWIHPKTNPKSRCQDCQSPNTSNCKQVCPPYI
ILYGAGSTGGLGIVETLNLPNKKIPNFLVGCSLFSSQQPAGIAGFGRGISSLPNQLGAKK
LSYCLVSHRFDDTSKSSMLVLDSSNEKSANLSYTPLLKNPVVARRNALLEYYYVGLRKIT
VGGQKVKIPYHYLTPNSKGDGGTIVDSGTTFTFLNHGIFEPVMSAFVNQVKGFSRTEKIE
KLTGLRPCFNVSGHKTVSLPELKFHFKGGAEMALPLANYFSIVGEKDVICLTMVTDRDSG
SELSTGPSIILGNFQMQNLFVEFDLKNEKFGFRQQVCK

Transcript Sequence

Gene sequence data has not been registered.